Applications and Software at Daresbury

Modules Available

We have provided environment modules on the system split broadly into three classes as follows:

  1. Compiler plus associated serial and SMP libraries (e.g. blas, lapack, hdf5, etc.). These are sub-divided into compiler distro and version number.
  2. MPI plus associated distributed memory parallel libraries (e.g. OpenMPI, SCALAPACK, etc.). These are subdivided by version and compiler built against.
  3. Application packages which are sufficient to run a single application as an end user.

Compiler

All compilers assume 64-bit for Linux with OpenMP (SMP) thread support.

compiler/gnu/4.2.1

Gnu compilers v4.2.1

compiler/intel/11.0

Intel compilers v11.0

compiler/pgi/8.0-3

PGI compilers v8.0 r3

Libraries bundled with these modules are as follows.

libgoto

Goto BLAS, see TACC Web site

liblapack

LAPACK, see NetLib Web site

libhdf5

HDF5 (not yet installed)

OpenMPI

We are currently using OpenMPI v1.4.1. Modules for v1.3.1 r1 and v1.3.3-1 are available for legacy codes.

openmpi/1.4.1/*

OpenMPI for Gnu, PGI or Intel compiler

openmpi/1.3.3-1/*

OpenMPI for Gnu, PGI or Intel compiler

openmpi/1.3.1-1/pgi

OpenMPI for PGI compiler

Libraries bundled with these modules are as follows.

...

MPICH-2

mpich/2-1.2.1/*

MPICH-2 for Gnu, PGI or Intel compiler

Packages

cp2k

CP2K Car-Parrinello code with GCC-4.4.1 and OpenMPI-1.4.1 - serial and parallel optimsed for 64-bit Linux (4/5/2010)

openfoam

OpenFOAM-1.6 with OpenMPI-1.3.3 and Gnu compiler - installed from 64-bit binary.

pelegant

loads appropriate paths for the Pelegant application compiled with Gnu compiler, Goto BLAS and LAPACK

sabre

loads appropriate paths for the Sabre-6.0 application sabe_p.out compiled with PGI compiler

saturne-1.4/*

Code_Saturne-1.4 with Gnu, PGI or Intel compiler and OpenMPI-1.3.1

scalapack/*

ScaLAPACK with Gnu, PGI or Intel compiler and OpenMPI-1.4.1. Includes BLAS, BLACS and LAPACK

visit

VisIT - visualisation suite

vorpal

Vorpal - licensed software from TX-Corp. (currently being installed)

Others

dot

appends a dot to the PATH so that local executables will be seen

use.own

allow users to add their own modules to MODULEPATH

Running Applications

Running OpenFOAM.

Running Code_Saturne.

Libraries

General Applications

Grid Software

DaresburyApplcations (last edited 2010-05-11 08:30:17 by RobAllan)

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